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Conda failures in dev-v2.0.0 SIF on CentOS 7

Status: Open.

#561 In khanlab/hippunfold;

· JAQuent opened on Jul 9, 2026

Possible reversed inner/outer surface order in myelin_map.smk ribbon-constrained mapping

Status: Open.

#560 In khanlab/hippunfold;

· sionlover opened on Jun 30, 2026

Poor detection of inter-digitation grooves

Status: Open.

#554 In khanlab/hippunfold;

· orenpoliva opened on Jun 3, 2026

Curvature has flipped intensities across hemispheres

Status: Open.

#552 In khanlab/hippunfold;

· JAQuent opened on May 28, 2026

Update local dry run tests for v2.0.0

bugSomething isn't workingSomething isn't working

Status: Open.

#551 In khanlab/hippunfold;

· Dhananjhay opened on May 26, 2026

v2.0.0: docker build fails with KeyError 'dseg_dentate' in import_template_dseg_dentate (--use-template-seg)

Status: Open.

#548 In khanlab/hippunfold;

· ajschadler12 opened on May 20, 2026

dev-v2.0.0: snakemake throws RuntimeError: can't start new thread, even when restricting cores

Status: Open.

#547 In khanlab/hippunfold;

· ajschadler12 opened on May 19, 2026

dev-v2.0.0: --inject-template dHCP gives "invalid choice"

Status: Open.

#546 In khanlab/hippunfold;

· sionlover opened on Apr 22, 2026

ADNI_T1w_v1 not in hippunfold_latest.sif

Status: Open.

#545 In khanlab/hippunfold;

· jordandekraker opened on Apr 20, 2026

Discrepancy in Neonatal Morphometry between HippUnfold v1.5.2 and v2.0.0 (dev)

Status: Open.

#538 In khanlab/hippunfold;

· mahmoud1yaser opened on Feb 5, 2026

Use tempdir for writing output dir in run_quick.py

Status: Open.

#518 In khanlab/hippunfold;

· akhanf opened on Oct 1, 2025

sge cluster requirements

Status: Open.

#513 In khanlab/hippunfold;

· jordandekraker opened on Sep 2, 2025