Issues

• issue with new pandas versions

  bug
  icbi-lab/infercnvpy#181 · Filter by author sylgeny opened on May 26, 2026

• chromosome heatmap takes up a massive amount of memory

  bug
  icbi-lab/infercnvpy#180 · Filter by author mheskett opened on Mar 16, 2026

• How to locate the genomic positions and gene lists of significant regions in CNV heatmaps?

  enhancement
  icbi-lab/infercnvpy#177 · Filter by author Allen-ZKW opened on Dec 11, 2025
  1

• CopyKAT unable to save results

  bug
  icbi-lab/infercnvpy#175 · Filter by author andrewni4313 opened on Oct 10, 2025

• Use joblib as parallel backend

  enhancement
  icbi-lab/infercnvpy#172 · Filter by author grst opened on Aug 20, 2025
  1

• infercnvpy.pl.chromosome_heatmap()

  enhancement
  icbi-lab/infercnvpy#166 · Filter by author yitengfei120011 opened on Jul 4, 2025
  7

• why it run correctly but no result

  bug
  icbi-lab/infercnvpy#154 · Filter by author AdotaLover opened on Mar 4, 2025
  3

• stable release

  enhancement
  icbi-lab/infercnvpy#121 · Filter by author wangjiawen2013 opened on Jan 3, 2024
  3

• infercnvpy.pl.chromosome_heatmap shows 1e9 map values for copykat results

  bug
  icbi-lab/infercnvpy#78 · Filter by author zsfrbkv opened on Apr 4, 2023
  4

• how are gene counts in groups that are all 0 handled

  bug
  icbi-lab/infercnvpy#73 · Filter by author amjass12 opened on Mar 23, 2023

• Accessing Metadata from AnnData

  icbi-lab/infercnvpy#50 · Filter by author shahrozeabbas opened on Sep 27, 2022
  6

• Citation

  icbi-lab/infercnvpy#34 · Filter by author FlorianBarkmann opened on Feb 17, 2022
  4

• Make nextflow pipeline to run copyKAT and SCEVAN

  icbi-lab/infercnvpy#28 · Filter by author grst opened on Dec 20, 2021
  2

• Heatmap chrom lenght - col width

  icbi-lab/infercnvpy#18 · Filter by author abyssum opened on Sep 6, 2021
  1

• Function to classify malignant/non-malignant cells

  icbi-lab/infercnvpy#11 · Filter by author rgranit opened on May 3, 2021
  2

• HMM-based CNV caller

  icbi-lab/infercnvpy#1 · Filter by author grst opened on Feb 3, 2021
  2