The auto-processing system is working, but when deciding how many new projects to submit, it doesn't count projects that have been re-submitted but haven't started yet. Example below—it re-submitted PRJNA387407 to run as single-end, but then when looking at how many projects were running, it only counted the two that had actually started.
Connected!
===DONE:
Project PRJNA387407
===RUNNING:
Project PRJNA517050
Project PRJNA886398
===INCOMPLETE:
PROJECT PRJNA387407 (paired)
43% of samples had warning for merged read count.
Re-running PRJNA387407 as single end.
Tracking down 3 projects
12/01/2023 13:01:11: 2 projects running. Starting 3 additional projects: ['PRJDB10530', 'PRJEB35665', 'PRJNA297124']
Launching PRJDB10530
Launching PRJEB35665
Launching PRJNA297124
The auto-processing system is working, but when deciding how many new projects to submit, it doesn't count projects that have been re-submitted but haven't started yet. Example below—it re-submitted PRJNA387407 to run as single-end, but then when looking at how many projects were running, it only counted the two that had actually started.