Skip to content
Draft
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
69 changes: 14 additions & 55 deletions README.md
Original file line number Diff line number Diff line change
@@ -1,62 +1,21 @@
# LiaoWJLab

## About Us
LiaoWJLab builds bioinformatics and machine-learning tools for immuno-oncology and precision oncology, focusing on predicting cancer immunotherapy responses.

LiaoWJLab specializes in immuno-oncology and precision oncology research. We are dedicated to developing innovative tumor immunotherapy prediction tools using bioinformatics and machine learning methods.
## Projects
- 🧬 <a href="https://github.com/LiaoWJLab/TMEclassifier">TMEclassifier</a> β€” Tumor microenvironment subtype classifier (R)
- 🫁 <a href="https://github.com/LiaoWJLab/LIRA">LIRA</a> β€” Lung cancer immunotherapy response predictor (R)
- πŸ“Š <a href="https://github.com/LiaoWJLab/IKCscore">IKCscore</a> β€” Immunotherapy scoring for NSCLC (R)
- πŸ”¬ <a href="https://github.com/LiaoWJLab/scsig">scsig</a> β€” Single-cell differential feature package (R)
- πŸ§ͺ <a href="https://github.com/LiaoWJLab/uaiscore">uaiscore</a> β€” Urothelial carcinoma immunotherapy stratification (R)
- 🧬 <a href="https://github.com/LiaoWJLab/FBI">FBI</a> β€” Fusion Burden Index pipeline (Shell, in progress)

## Main Projects

### Open-source Projects

#### 🧬 [TMEclassifier](https://github.com/LiaoWJLab/TMEclassifier)
An ensemble machine learning–based tumor microenvironment subtype classifier
- Language: R
- Applications: gastric cancer, immunotherapy, tumor microenvironment analysis
- ⭐ Stars: 7

#### 🫁 [LIRA](https://github.com/LiaoWJLab/LIRA)
AI model for predicting lung cancer immunotherapy response
- Language: R
- Applications: lung cancer immunotherapy response prediction
- ⭐ Stars: 3

#### πŸ“Š [IKCscore](https://github.com/LiaoWJLab/IKCscore)
Immunotherapy prediction scoring system for non–small cell lung cancer
- Language: R
- Applications: non–small cell lung cancer immunotherapy prediction
- ⭐ Stars: 2

#### πŸ”¬ [scsig](https://github.com/LiaoWJLab/scsig)
Single-cell differential feature identification package
- Language: R
- Applications: single-cell sequencing data analysis
- ⭐ Stars: 2

#### πŸ§ͺ [uaiscore](https://github.com/LiaoWJLab/uaiscore)
Adjuvant immunotherapy stratification tool for urothelial carcinoma
- Language: R
- Applications: urothelial carcinoma immunotherapy stratification

### In Progress

#### 🧬 [FBI](https://github.com/LiaoWJLab/FBI)
Fusion Burden Index analysis pipeline
- Language: Shell
- Status: Last updated on 2025-11-15

## Research Focus

Our research primarily focuses on:
- 🎯 Predicting responses to cancer immunotherapy
- πŸ”¬ Tumor microenvironment analysis
- 🧬 Single-cell sequencing data analysis
- πŸ€– Applying machine learning to precision oncology
- πŸ“Š Developing bioinformatics tools
## Focus
- Predicting immunotherapy response
- Tumor microenvironment and single-cell analysis
- Machine learning for precision oncology

## License
MIT

The open-source projects under this organization are licensed under the MIT License.

---

**LiaoWJLab** β€” Focused on Immuno-Oncology and Precision Oncology
**LiaoWJLab** β€” Immuno-Oncology &amp; Precision Oncology